YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RM12_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPSATSLLR GPCLGLRAAA LRLVRQQVPH VCAVRLMRCS SHRRGEALTG APLDNAPKEY  60
   61 PPKIQQLVQD IASLTLLEIS DLNELLKKTL KIQDVGLMPM GGMVPGAAPA PTAPEAAEED 120
  121 VPKQKERTHF TVRLTEAKPV DKVKLIKEIK NYVQGINLVQ AKKLVESLPQ EIKANVAKAE 180
  181 AEKIKAALEA VGGTVVLE

Type	Start	End	Confidence
Signal Peptide	1	20	0.79
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	198	0.99