YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6224893, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLVLLGLV AFSECIVKIP LRRVKTMRKT LSGKNILNNF LKEHAYRLSQ ISSCGSNLTF  60
   61 HPLRNIKDRL YVGNITIGTP PQEFQVIFDT GSSDLWVTSV FCTSPTCSTH VMFRHFDSST 120
  121 FRPTKKTFSI NYGSGRMKGV VVHDTVRIGD LVSTDQPFGL SVVELGFDGI PFDGVMGLNY 180
  181 PKLSFSGAIP IFDNLRNQGA ISEPVFAFYL SKDEQEGSVV MFGGVDHRYY KGELNWIPLI 240
  241 QAGDWSVHMD SISMKRKVIA CSGGCKAVVD TGTSLIEGPR RLVNNIQKLI RAMPRGSEYY 300
  301 VSCSAVNTLP PIIFTIKGIN YPVPAQAYIL KDSRGHCYTT FKEDRLSPPS TETWILGDVF 360
  361 LRRYFSVFDR GNDRIGLARA V

Type	Start	End	Confidence
Signal Peptide	1	15	0.95
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	381	0.99