YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28603728, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLVLLGLV AFSECIVKIP LRRVKTMRKT LSGKNTLNNF LKEHPYRLSH ISFRGSNLTT  60
   61 LPLRNIRDML YVGNITIGTP PQEFQVVFDT GSSDLWVPSD FCTSPACSTH VRFRHFQSST 120
  121 FRPTTKTFRI IYGSGRMKGV VAHDTVRIGN LVSTDQPFGL SMAEYGLESR RFDGILGLNY 180
  181 PNLSCSGAIP IFDKLKNQGA ISDPIFAFYL SKDKREGSVV MFGGVDHRYY KGELNWVPLI 240
  241 RAGDWIVHVD RITMKREVIA CSDGCAALVD TGTSLIQGPG RVIDNIHKLI GATPRGSKHY 300
  301 VSCSVVNTLP SIIFTINGIN YPVPAPAYIL KDSRGYCYTA FKEQRVRRST ESWLLGDVFL 360
  361 RLYFSVFDRG NDRIGLARAV

Type	Start	End	Confidence
Signal Peptide	1	15	0.95
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	380	0.99