YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28603726, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLVLLGLV AFSECVVKIP LRRVKTMTKT LSGKNMLNNF LKEHAYRLSQ ISFHGSNLTI  60
   61 HPLRNIRDLF YMGNITIGTP PQEFLVVFDT GSSDLWVPSD FCTSPACSKH FRFRHLQSST 120
  121 FRLTNKTFSI EYGSGTMEGI VAHDTVRIGD LVSTDQPFGL SMTESGFEGI PFDGVLGLNY 180
  181 PNISFSGAIP IFDKLKNQGA ISEPVFAFYL SKDEQEGSVV MFGGVDHRYY KGELKWVPLI 240
  241 EAGDWIVHMD CISMRRKVIA CSGGCEAVVD TGVSMIKGPK TLVDNIQKLI GATLRGFKHY 300
  301 VSCSAVDTLP SITFTINGIN YRVPARAYIL KDSRGCCYSS FQETTVSPST ETWILGDVFL 360
  361 RLYFSVFDRG NDRIGLARAV

Type	Start	End	Confidence
Signal Peptide	1	15	0.96
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	380	0.99