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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27807511, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPGPTAPSS GAPRLAGVGE TPPVAPLAAA GMDLPGTAVP SVPEDAAAVS RGGGGVRGEG  60
   61 AAAAGDGLGR PLGPTPSQSR FQVDLVSENA GRAAAAAASA GAGGKETPAD GKASVESGQA 120
  121 KASEEAKGRF RVNFVDPAAS SSADESVSDA AGIGGDGPNV SFQNGGDTVL SEGSSLHSGG 180
  181 GGGGSGHHQH YYYDTHTNTY YLRTFGHNTM DAVPRIDHYR HTAAQLGEKL LRPSLAELHD 240
  241 ELEKEPFEDG FANGEESTPT REAVVTYTAE SKGVVKFGWI KGVLVRCMLN IWGVMLFIRL 300
  301 SWIVGQAGIG LSVIVIAMAT VVTTITGLST SAIATNGFVR GGGAYYLISR SLGPEFGGAI 360
  361 GLIFAFANAV AVAMYVVGFA ETVVELLKEH SILMIDEIND IRIIGAITVV ILLGISVAGM 420
  421 EWEAKAQIVL LVILLLAIAD FVIGTFIPLE SKKPKGFFGY KYEIFSENFG PDFREEETFF 480
  481 SVFAIFFPAA TGILAGANIS GDLADPQSAI PKGTPLAILI TTLVYIGIAV SVGSCVVRDA 540
  541 TGNVNDTIVT ELTNCTSAAC KLNFDFSSCE TNPCSYGLMN NFQVMSMVSG FAPLISAGIF 600
  601 SATLSSALAS LVSAPKIFQA LCKDNIYPAF QMFAKGYGKN NEPLRGYILT FLIALGFILI 660
  661 AELNVIAPII SNFFLASYAL INFSVFHASL AKSPGWRPAF KYYNMWISLL GAILCCIVMF 720
  721 VINWWAALLT YVIVLGLYIY VTYKKPDVNW GSSTQALTYL NALQHSIRLS GVEDHVKNFR 780
  781 PQCLVMTGAP NSRPALLHLV HDFTKNVGLM ICGHVHMGPR RQAMKEMSID QAKYQRWLIK 840
  841 NKMKAFYAPV HADDLREGAQ YLMQAAGLGR MKPNTLVLGF KKDWLQADMR DVDMYINLFH 900
  901 DAFDIQYGVV VIRLQEGLDI SHLQGQEELL SSQEKSPGVK DVVLSVEYSK KSDLDTSKPS 960
  961 SEKSITHKED GKTPIQPLLK KESKGPAVPL NVADQKLLEA STQFQKKQGK NTIDVWWLFD1020
 1021 DGGLTLLIPY LLTTKKKWKD CKIRVFIGGK INRIDHDRRA MPTLLTKFRI DFSDIMVLGD1080
 1081 INTKPKKENI VAFDEMIEPY RLHEDDKEQD IADKMKEDEP WRITDNELEL YKTKTYRQIR1140
 1141 LNELLKEHSN TANIIVMSLP VARKGAVSSA LYMAWLEALS KDLPPILLVR GNHQSVLTFY1200
 1201 S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle