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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18656905, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRAPALLFS CLLGLCALVP RLPGLNICTS GSATSCEECL LIHPKCAWCF KEDFGSLRSV  60
   61 TSRCDLKANL IRNGCGVEFE SPASSTQVLR SLPLSSKGSS PAGSDVIQLT PQEVTVTLRP 120
  121 GDKTAFQLQV RQVEDYPVDL YYLMDLSLSM KDDLENIRSL GTKLAEEMRK LTSNFRLGFG 180
  181 SFVDKNISPF SYTAPRYQTN PCIGYKLFPN CVPSFGFRHL LPLTDRVDSF NEEVRKQRVS 240
  241 RNRDAPEGGF DAVLQAAVCK EKIGWRKDAL HLLVFTTDDV PHIALDGKLG GLVQPHDGQC 300
  301 HLNEANEYTA SNQMDYPSLA LLGEKLAENN INLIFAVTKN HYMLYKNFTA LIPGTTVEIL 360
  361 HGDSKNILQL IINAYNSIRS KVELSVWDQP EDLNLFFTAT CQDGVSYPGQ RKCEGLKIGD 420
  421 TASFEVSVEA RSCPSKHVQH TFTLRPVGFR DSLEVGVTYN CRCGCSAGLE PDSARCSSNG 480
  481 TYVCGLCECN PGYLGTRCEC QEGESQSGYQ NLCREAEGKP LCSGRGQCSC NQCSCFESEF 540
  541 GKIYGSFCEC DNFSCARNKG VLCSGHGECH CGECKCHAGY IGDNCNCSTD ISTCQARDGH 600
  601 ICSDRGHCVC GQCQCTEPGA FGETCEKCPT CPDACSTKRD CVECLLLHSG SSADNQTCQN 660
  661 LCKDEVITRV DTIVKDDQEA VLCFYKTAKD CVMMFTYSEL PSGKSNLTVL REPECGTAPS 720
  721 AMTILLAVVG SILLTGFALL VIWKLLVTIH DRREFAKFQS ERSRARYEMA SNPLYRKPIS 780
  781 THTVDFTFNK FNKSYNGTVD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle