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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DJC14_BOVIN
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKHPGEGG LCGAHHSGGA SLRTLGPSVD PDILSFSGLR DSAGSAPNGT RCLTEHSSPK  60
   61 YTQPPNPAHW SDPSHGPPRG PGPPLAEEDP DQSEASSEES GVDQELSREN ETGYQDDGNS 120
  121 SFLSIPSTCN CQGTPGIPEG PYSEGRDSSS SNFCHHCTSP ALGEDEELEG EYDEEEPLKF 180
  181 PSDVSRVPSE KKPAPRRQRH RVPAKEDTRE GGRRDPRSPG RHRLGRKRSQ ADKRRGLGLW 240
  241 GAEELCQLGQ AGFWWLIELL VLVGEYVETC GHLIYACRQL KGSDLDLLRV WVGVWAGRLR 300
  301 GWAQVMFQFL SQGFCYGAGL FTRFLRLVGA LLLLALALLL GCLQLGWRFL VGLSDRLGWR 360
  361 DKATWIFSWL ASPTWQRCLI LLRESRPWQQ LVRIVQWGWL ELPWVKQRTN RQANAPVAGG 420
  421 RYCQPEEEVA RLLTMAGVPE DELNPFHVLG VEATASDVEL KKAYRQLAVM VHPDKNHHPR 480
  481 AEEAFKVLRA AWDIVSNPER RKEYEMKRMA ENELSRSVNE FLSKLQEAMN TMMCSRCQGK 540
  541 HRRFEMDREP KSARYCAECN RLHPAEEGDF WAESSMLGLK ITYFALMDGK VYDITEWAGC 600
  601 QRVGISPDTH RVPYHISFGS RMPGTSGRQR ATPDAPPADL QDFLSRIFQV PPGQMSNGNF 660
  661 FAAPQPGPGA TAASKPNSTV PKGEAKPKRR KKVRRPFQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle