YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148744280, gi...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSEDFSATE TSSLHLKREQ QSHATGTYSA TYHEGSIQVP IPCAVVNVVF ITTLIIALVA  60
   61 LSVGQYNCPG QYASSAPPNT HVFPCSDDWI GHKGKYYLIS KKTKNWTLAQ NFCSKHGATL 120
  121 AVIDSKEDMN FLKQHVGRAE HWIGLKNEAG QTWKWSNGQE FNNWFNLTGS ENCAVLNSAE 180
  181 ISSTECDKNL HWICSKPSK

Type	Start	End	Confidence
Cytoplasmic	1	42	0.52
Transmembrane Helix	43	61	0.67
Non-Cytoplasmic	62	199	0.80