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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LYAG_BOVIN
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRWPPCSRP LLGVCTLLSL ALLGHILLHD LEVVPRELRG FSQDEIHQAC QPGASSPECR  60
   61 GSPRAAPTQC DLPPNSRFDC APDKGITPQQ CEARGCCYMP AEWPPDAQMG QPWCFFPPSY 120
  121 PSYRLENLTT TETGYTATLT RAVPTFFPKD IMTLRLDMLM ETESRLHFTI KDPANRRYEV 180
  181 PLETPRVYSQ APFTLYSVEF SEEPFGVVVR RKLDGRVLLN TTVAPLFFAD QFLQLSTSLP 240
  241 SQHITGLAEH LGSLMLSTNW TKITLWNRDI APEPNVNLYG SHPFYLVLED GGLAHGVFLL 300
  301 NSNAMDVVLQ PSPALSWRST GGILDVYIFL GPEPKSVVQQ YLDVVGYPFM PPYWGLGFHL 360
  361 CRWGYSTSAI TRQVVENMTR AYFPLDVQWN DLDYMDARRD FTFNKDHFGD FPAMVQELHQ 420
  421 GGRRYIMIVD PAISSSGPAG TYRPYDEGLR RGVFITNETG QPLIGQVWPG LTAFPDFTNP 480
  481 ETLDWWQDMV TEFHAQVPFD GMWIDMNEPS NFVRGSVDGC PDNSLENPPY LPGVVGGTLR 540
  541 AATICASSHQ FLSTHYDLHN LYGLTEALAS HRALVKARGM RPFVISRSTF AGHGRYSGHW 600
  601 TGDVWSNWEQ LSYSVPEILL FNLLGVPLVG ADICGFLGNT SEELCVRWTQ LGAFYPFMRN 660
  661 HNALNSQPQE PYRFSETAQQ AMRKAFTLRY VLLPYLYTLF HRAHVRGETV ARPLFLEFPE 720
  721 DPSTWTVDRQ LLWGEALLIT PVLEAEKVEV TGYFPQGTWY DLQTVPMEAF GSLPPPAPLT 780
  781 SVIHSKGQWV TLSAPLDTIN VHLRAGHIIP MQGPALTTTE SRKQHMALAV ALTASGEAQG 840
  841 ELFWDDGESL GVLDGGDYTQ LIFLAKNNTF VNKLVHVSSE GASLQLRNVT VLGVATAPQQ 900
  901 VLCNSVPVSN FTFSPDTETL AIPVSLTMGE QFVISWS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle