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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48675959, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLWGILCFL IFLGKTWGQE QTYVISAPKI LHVGAAENIV VQVYGYTEAF AVTVSVKSYP  60
   61 DKKITYSSMY VILSTENKFQ NSAFLTIQPK QLLGKPNSVS HVYLDIVSKH FSRSKKIPVT 120
  121 YDNGFLFIHT DKPVYTPHQS VKVRVYSLND ELKPAKRETV LTFIDPQGSE VEVLEENDYT 180
  181 GIISFPDFKI PSNPKYGVWT IQAKYREDFS TTGTAYFEIK EYVLPHFSVS IEPENNFIGY 240
  241 KDFNDFEITV KARYFYNKVV SEADVYMFFG IREDLKDEQK VMMQKAMRNT MLINGIAKVT 300
  301 FNSETAIKEL SYDSLEDLNN KYLYIGVTVI ESTGGFSEEA EIPGIKYVLS PYKLNLVATP 360
  361 LFVKPGIPYS IKVQVKDSLD LLVGGVPVIL SAQTLDANQE TSDLESKKSV TRSRDGVASF 420
  421 VVNLPAGVTV LEFNIRTEDP DLSDENQARA NYRAIAYSSL SQSYLYIEWT QNYKPVLVGE 480
  481 HLNVVVTPKS PYIDKITHYN YLILSRGKIV HFGTREKLSN SAYQSINIPV TQNMVPSARL 540
  541 LVYYIVTGEQ TAELVSDSVW LNIEEKCGNQ LQVHLSPNTD TYSPGQHVSL NLVTELDSWV 600
  601 ALSAVDKAIY GVQMTAKKPL ERVFQTFEKN DLGCGAGGGR NNADVFHLAG LTFLTNANTD 660
  661 DIRENDEPCK DILRPKRMLQ KKIEEEAAKY KYAMLKKCCY DGAYRNDDET CEERAARIKI 720
  721 GPKCVKAFKD CCYIANQVRA EESHKNIQLG RLHIKTLLAV TNPEIRSYFP ESWLWEVHHV 780
  781 PRRNQLQFVL PDSLTTWEIQ GIGISNSGIC VTDTLNAKVL KDVFLEMSIP YSVVRGEQIQ 840
  841 LKGTVYNYGT SGVLFCVKMP PVEGICSSGS PGIDPQGKKS SRCQPQKIEG SSSHLVTFDV 900
  901 LPLEIGLHNI NFSLETSLGR EILVKTLRVV PEGVKRESYA GITLDPRGIY GAMTRRKEFP 960
  961 YRVPLDLVPK TKVKRIVSVK GLLIGEVMSA VLSQEGIDIL THLPKGNAEA ELMSIVPVFY1020
 1021 VFHYLEAGNN WNIFSSNSLA QRQNLQKKLR EGVVSVMSFR NADHSYSMWK SGSASTWLTA1080
 1081 FALRVLGQAS KYIDQDLNSI CNSILWLVEK CQLGNGSFKE NSEYQPIKLQ GTLPIEAQEN1140
 1141 TLYLTAFAVI GIRKAFDLCP LMKISMALTK ADTFLLENTR STRSTFALAI AAYALSLGDK1200
 1201 SHPQFRSIVS ALKKEALVKG NPPIYRFWKD DLQKKDRSVP NTGTARMVET TAYALLTSLN1260
 1261 LKDMNYVNPI IKWLSEEQRY GGGFYSTQDT INAIEGLTEY SLLIKNFLLN MDVKVSYKHR1320
 1321 GDFYHYKITE KNFIGRPVEV PLNDDLVVFS TGQNSGLATV HVKTVVHKTS TSEEVCSFDL1380
 1381 KIEIQDIEAS SYSSSEYKRI VACASYKPSR EESSSGSSHA VMDISLPTGV NANAEDLRAL1440
 1441 VEGVDQLLTD YEIKDGHVIC QLNSIPSNNF LCVRFRIVEL FQVGFLSPAT FTVYEYHRPD1500
 1501 KQCTMFYSMS QTKLQKVCEG VTCKCVEADR GQMQTEVDLT ISVNTRKETA CKPEIAYVYK1560
 1561 VKIIAMTEES AFVKYTASLL DVYKAGEAVA EKGSEITFIK KTTCTNANLE KGKQYLIMGK1620
 1621 EALQIKHNFN FKYIYPLDSS TWIEYWPTDT ACPSCQTFLA NLDEFTEDIF LNNCENA

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