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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49274649, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.78
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKENVPSTVV FILLLFLNIS LLNGQSPPGK PEIFKCRSPE KETFTCWWKP GADGGLPTNY  60
   61 TLTYHKEGET FTHECPDYKT GGPNSCYFNK KHTSIWTIYI ITVNATNQMG SSSSDPRYVD 120
  121 VTYIVEPDPP VNLTLELKKP EDQKPYLWIK WLPPTLVDVR SGWLTLQYEI RLQPEKTAEW 180
  181 ETHFAGQQTQ FKILSLYPGQ KYLVQVRCKP DHGFWSEWSP ESSIQIPNDF SMKDTTMWIF 240
  241 VAILSAVVCL IMIWAVALKG YSMVACILPP VPGPKIKGFD THLLEKGKSE ELLSALGCQD 300
  301 FPPTSDCEDL LVEFLEVDDS EDQQLMPAHS KEHPSQGRKP THLDPDSDSG RGSCDSPSLL 360
  361 SEKCDEPRAN PPKFHTPEGI EKPGDPETNL PRPQDPQSTS VESKLLYFHA DGSKSSTWPL 420
  421 PQPPILHDPG SSYHNLADVG QLVLGTAGAT AALLEKTDRH AFNPPKTTET GGEGRATEQK 480
  481 ESESFHSKTD QGTVWLLPQD KGPFVSPKPM EYVEIHKVSK DGALALLPKQ QENGDRPEKA 540
  541 GAPETSKEYA QVSRVMDNHI LVLVQDPRAR NVAPFEEPTK ETPPSRPQNP AAKDLAGFTT 600
  601 APGHCRHPLG GLDYLDPAGF MHSFQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle