YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NNRE_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLRALLGL GLLVAGSRLS RVRVQAGSCR AGATWWVPQR LISGGRGDSE VMASSAVKYL  60
   61 SQEEAQAVDQ ELFNEYQFSV DQLMELAGLS CATAIAKAYP PTSLSRSPPT VLVICGPGNN 120
  121 GGDGLVCARH LKLFGYQPTI YYPKRPNKPL FTALVTQCQK MDIPFLGEMP PEPMLIDELY 180
  181 ELVVDAIFGF SFTGEVREPF RSILSVLNGL TVPIASIDIP SGWDVEKGSS GGIQPDLLIS 240
  241 LTAPKKSATQ FTGRYHYLGG RFVPPALEKK YQLNLPPYPD TECVYRLQ

Type	Start	End	Confidence
Signal Peptide	1	26	0.90
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	288	0.99