YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	STEP1_ARATH
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSQVSASL AFSLPNSGAL KLATITNPTS TCRVHVPQLA GIRSTFASGS PLLPLKLSMT  60
   61 RRGGNRAASV SIRSEQSTEG SSGLDIWLGR GAMVGFAVAI TVEISTGKGL LENFGVASPL 120
  121 PTVALAVTAL VGVLAAVFIF QSSSKN

Type	Start	End	Confidence
Cytoplasmic	1	85	0.59
Transmembrane Helix	86	107	0.76
Non-Cytoplasmic	108	119	0.63
Transmembrane Helix	120	140	0.92
Cytoplasmic	141	146	0.62