YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50603862, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVREQYVTTT EESGVLSPVS EYIYMIGIYG WRKRCLYLFV LLLLIILVVN FALTIWILRV  60
   61 MWFNAEGMGY LQVHEDGLRL EGESDFLFPV YAQEIDSRED SALLIQSSEN VTLNARNANG 120
  121 DVTGSVSVGP SQAEGFSKYF NISSNHDENL FYADGSGAVV GKGKLRVTGP EGALFEHSVR 180
  181 TPMVKAVLNK ELKLESPTRS LSMDAPKGVH VKALAGNVDV TAHFDILLHS AEGLLILDAE 240
  241 TVRLPKLPVG EAGTSGDSQG MYNMYEVCVC PSGKLFFSTA GVSSTCSESQ DC

Type	Start	End	Confidence
Cytoplasmic	1	34	0.90
Transmembrane Helix	35	58	0.92
Non-Cytoplasmic	59	292	0.91