YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE37581
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVKLHPKNT FTIIMVVGFL YLAYLIFFES GDGMPEIDVD LKDVISYAVL AIEMGGHAVM  60
   61 KVNEEKNLNA AAKGLTDEGK EELLTRADLI SNHLILDILQ RFPQLQIVSE EKKSEFSERE 120
  121 IEPYRLDNYA VWQSVKEILD KIPSRRLQLS DVRVFVDPLD ATQEFTEGLT EYVTVMACIV 180
  181 LDAEPIFGAI YRPFFNETIF GLQGFGVITS DGVRLNPIED SKTAKKVVVS RSHAGKVKEI 240
  241 VEKVYGDKMN IEPAGGSGYK TLRLVNGTAE LYLHTTAIKK WDTCAGDAIL RTMGGAMLDL 300
  301 EGQPLRYSSA DPLLNKKGLL ATVRNPYSYL NKFQGIQIL

Type	Start	End	Confidence
Cytoplasmic	1	8	0.88
Transmembrane Helix	9	28	0.88
Non-Cytoplasmic	29	339	0.92