YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE37582
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYTPIEPKM QVKLHPKNTF TIIMVVGFLY LAYLIFFESG DGMPEIDVDL KDVISYAVLA  60
   61 IEMGGHAVMK VNEEKNLNAA AKGLTDEGKE ELLTRADLIS NHLILDILQR FPQLQIVSEE 120
  121 KKSEFSEREI EPYRLDNYAV WQSVKEILDK IPSRRLQLSD VRVFVDPLDA TQEFTEGLTE 180
  181 YVTVMACIVL DAEPIFGAIY RPFFNETIFG LQGFGVITSD GVRLNPIEDS KTAKKVVVSR 240
  241 SHAGKVKEIV EKVYGDKMNI EPAGGSGYKT LRLVNGTAEL YLHTTAIKKW DTCAGDAILR 300
  301 TMGGAMLDLE GQPLRYSSAD PLLNKKGLLA TVRNPYSYLN KFQGIQIL

Type	Start	End	Confidence
Cytoplasmic	1	17	0.90
Transmembrane Helix	18	37	0.90
Non-Cytoplasmic	38	348	0.92