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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23506105, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSYFFLGTV VVVALAIYTL LGTISFMVYR KFRLHQEKNN ISSCFSFSSC FSFSSSSSTS  60
   61 SPGRKHQVFP SFHGADVRKS FLSHIMKEFK SKGIDIFIDK DIKRGKSIGP ELTEAIRGSR 120
  121 VAIVFLSRKY ASSSWCLNEL ALIMKCRKEL GLTVMTLFYD LDPTDVRKQT GDFGMAFKET 180
  181 CKGKTKDEIG RWRHALEEVA KIAGYHSSIW DNEADMIGIV TTDISNTLNI STPSSDFSDL 240
  241 VGMEDHMKKL ERMLYLDLND VRMIGIWGPP GIGKTSIARV LFRKHSDSFD LSVFMETVKG 300
  301 YTRPGCSDEH GLKLHLQQQF LSQIFNQKDV EVPHLGVVQD RLRDKRVLVV LDDVDQSAQL 360
  361 EAMAKENKWF GPGSRIIITT QDRRLLKAHG IKDVYKVDLP PPDDAFQIFC MYAFGKTSPK 420
  421 HGFEELAWEA TYLSGIHPSG IKSMGSYFRK MSKPEWVNAL QRLRTSKLDS ESPRTHRKLI 480
  481 NRLRNVKQKM LSNTLSRIRK HQIASAAAKA ASVYETSIKE EVDSSAESLN H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle