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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPI1_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVEVVNSGG FEVAPAPFEG KPEKNGKLDQ GKGDDAPINF GSVGELPKNA EENNNKVVNS  60
   61 DAPKNAAEEW PVAKQIHSFY LVKYRSYADP KIKAKLDLAD KELEKLNKAR TGVLDKLRAK 120
  121 RAERSELFDL LDPLKSERKG FNTMFDEKRK EMEPLQQALG KLRSNDGGSA RGPAICSSEE 180
  181 ELNSMIYSYQ YRIQHESIPL TEEKQILKEI RLLEGTRDKV IANAAMRAKI KESMGQKDDI 240
  241 QGQVKLMGAG LDGVKKERQA ISARINELSE KLKATKDEIT VLENELKTVS EKRDKAYSNI 300
  301 HDLRRQRDET NSEYYQNRTV LNKARDLAAQ KNISELEALA NAEVEKFISL WCSKKNFRED 360
  361 YEKRILQSLD SRQLSRDGRM RNPDEKPLIA PEAAPSKATP SETEVVPKAK AKPQPKEEPV 420
  421 SAPKPDATVA QNTEKAKDAV KVKNVADDDD DEVYGLGKPQ KEEKPVDAAT AKEMRKQEEI 480
  481 AKAKQAMERK KKLAEKAAAK AAIRAQKEAE KKEKKEQEKK AKKKTGGNTE TETEEVPEAS 540
  541 EEEIEAPVQE EKPQKEKVFK EKPIRNRTRG RGPETIPRAI LKRKKSTNYW VYAAPAALVV 600
  601 LLLLVLGYYY VL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle