YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51327354
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGTGRTLLNT SKAFHTPRAS MSFASLPKGK KIALTTIGVL TTGGAGLALM LQQSVKASDL  60
   61 ELHPPTYPWS HGGFLSSLDH ASVRRGYQVY KQVCSACHSM EYLAFRNLVG VSHTEDEVKT 120
  121 LAEEIEVVDG PDDNGEMFTR PGKLSDYFPK PYANPEAARA ANNGALPPDL SYIVNARHGG 180
  181 EDYVFSLLTG YCDPPAGVSL REGLYYNPYF PGQAIGMAPP IYNEVLEYDD GTPATMSQVA 240
  241 KDVCTFLRWA AEPEHDDRKR MGLKVLLGGA LLIPLIYYIK RHKWSVLKSR KIAYRPPK

Type	Start	End	Confidence
Cytoplasmic	1	31	0.77
Transmembrane Helix	32	51	0.76
Non-Cytoplasmic	52	298	0.86