YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57525731, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSRASVHG SSMFSSMTNS VSDPRFRFRW RAIGVAALLA LAVLLFQHHT STDHGSDAPE  60
   61 NSPRSWRSSR DVSGAMVDAD PIGTRYNDTY PLSPPEHTVN GIRYRIAVIA DLDTNSRSKK 120
  121 DNTWFSYLKR GHVLVSESGD SVSVEWDPNT VALESHLSEK GRGMELSELV AFNGHLYSVD 180
  181 DRTGVVYRIE GNRAVPWVIL TDGDGSVSKG FKAEWMAVKD ERLYVGGLGK EWTTITGEFV 240
  241 NNNPEWVKVV GFHGDVEHEN WVPRYSALKR AADIKPPGYL IHESAVWSER LQRWFFLPRR 300
  301 ASSERYDETA DERRGTNLIL RCSSDFSRIS ASRVGPLKPT LGFSSFKFIP DTDDQIILAL 360
  361 KSEEDAGNIA TYITAFTLDG RILLPDTKIA DVKYEGLEFI

Type	Start	End	Confidence
Signal Peptide	1	52	0.92
N-region	1	43
H-region	44	49
C-region	50	52
Cleavage Site	52	53
Non-Cytoplasmic	53	400	0.99