YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57768839, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAKAPKPW TLYLQNHSSL FPLFVFILSQ CYRISADDGG IEELATEKEA EESHRQDSVN  60
   61 LLTFILLLTL TILTIWLFKH RRVRFLHETG LAMIYGEKSV FLTLRKTSDI VCVLKPSESP 120
  121 SVTAFFFFLR K

Type	Start	End	Confidence
Cytoplasmic	1	12	0.78
Transmembrane Helix	13	32	0.67
Non-Cytoplasmic	33	58	0.79
Transmembrane Helix	59	78	0.92
Cytoplasmic	79	131	0.82