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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50417196, gi|...
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRTEELHSC NGTLKSRSGQ KQTENYTLKN GYHKNEKVQK NGNGFHQPRV RGEDSFEEAP  60
   61 MYVAVLTYMG YGIVILFGYF RDFLRAVGLE KCHQAQEREE QKDFVPLYQD FENFYKRNLY 120
  121 MRVRDNWNRP ICSLPGPVFD LMERVSDDYN WTFRLTGRTI ENVINMGSYN YLGFAENNVD 180
  181 FLKTVAEKTR QYGVGVCSTR QELGNFSIHE ELEQLVADFL GVESAMAFGM GFATNSMNIP 240
  241 ALVGKGCLIL SDELNHTSLI LGARLSGATI RVFKHNNMQS LEKLLKEAIC SGQPRTHRSW 300
  301 KKILIMVEGI YSMEGSLVRL PEIIALKKKY KAYLYLDEAH SIGAVGPTGR GVTEHFGVDP 360
  361 KEIDVLMGTF TKSFGATGGY IAGKKELVDY LRCHSHSAVY ATAMSPPVVE QIIRAIKCIM 420
  421 GVDGTTEGQR RVRQLAENTR YFRSRLKEMG FIIYGNKDSP VIPLLLYQPG KVGAFSRAML 480
  481 KRKIGVVVVG FPATTITEAR ARFCVSAAHT RDMLNKVLQS LDELGDYIRV KFSRHRRPYR 540
  541 PELYNATNFG LDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle