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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50417066, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVKVKNPWH RPVVIFLMAV VAVGIVIMVS ISVVQHKPLP QKYKYGIVLD AGSSHTSVFI  60
   61 YKWPAEKENN TGMVQQHHTC NVKGKGISSY FDKPHGAGAS LEECMKEAKE KIPAHRHSET 120
  121 PVYLGATAGM RLLKMEDEMA SEKVLTSVAH SLKTYPFSYQ GARILSGQEE GAFGWITVNY 180
  181 LSENLRKPAG TLGALDLGGA STQITFVPQQ IIESSDNSID FRLYGNDYHL YTHSFLCYGK 240
  241 DQALKLAMAE KLRSTPDKTD AILLRDPCFH PGYNTTKTLE SVNTPCMKPL KMPKEQFSHV 300
  301 GLGNWSQCQE SIRKVFNTSH CPYSGCSFNG VFQPTVEGKF GAFSAFFFVM DFLNLKNDSL 360
  361 DKTKQRLAMY CSTPWQKIVQ DHPKVKEKYL SEYCFSATYI LTLLEHGYNF TSDNWNDIKF 420
  421 IKKIGDSDAG WTLGYMLNLT NMIPAEDPDK PLMPHGGYVT FMILFSLLIL VLIIMAYIYF 480
  481 RRFTKTAQKD II

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle