YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|87044895, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELDELRLLD ALVYLEGFLA FVAFVGLQMV GSSYGRYSSQ WSGRRVPARP AWFLQELPSM  60
   61 AWPLYECIRP AAARLGNLPN RVLLAMFLIH YVQRTLVFPV LIRGGKPTLL FTFVLAFLFC 120
  121 TLNGYLQSRY LSQFAVYAED WVTHPCFLTG FALWLVGMVI NIHSDHILRN LRKPGETGYK 180
  181 IPRGGLFEYV SSANYFGELV EWCGFALASW SLQGVVFALF TLCALFTRAR QHHQWYLEKF 240
  241 EDYPKTRKIL IPFLL

Type	Start	End	Confidence
Cytoplasmic	1	11	0.56
Transmembrane Helix	12	32	0.88
Non-Cytoplasmic	33	107	0.44
Transmembrane Helix	108	126	0.94
Cytoplasmic	127	140	0.49
Transmembrane Helix	141	162	0.88
Non-Cytoplasmic	163	205	0.58
Transmembrane Helix	206	227	0.88
Cytoplasmic	228	255	0.83