YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51258782, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIAGPVRII VILLTVGLTW ILASIMLGTQ SGFPRIPALI GGHEAMSTAD PRPRRYKCGL  60
   61 PRPCPEKHFA FRVVSGAANV IGPKICLEDK MLLSSIQNNV GRGLNVALVN GVNGELINAK 120
  121 TFDMWSGDVT ELLSFLRPIH EGTVVMIASF DDPATKMTED IRKLFAELGS ASIKDVGFRD 180
  181 SWAFVGAKGV QDKSPFEQLI KNNKNTNKYE GWPEAVELEG CIPHRTMEEE

Type	Start	End	Confidence
Cytoplasmic	1	8	0.64
Transmembrane Helix	9	29	0.70
Non-Cytoplasmic	30	230	0.96