YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37361564
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMILFMLTL SLALSTILTA VNFWLAQTNP DTEKLSPYEC GFDPLGSARL PFSIRFFLVA  60
   61 ILFLLFDLEI ALLLPLPWAT QLHSPLTTLT WTSTIILLLT IGLAYEWTQG GLEWAE

Type	Start	End	Confidence
Cytoplasmic	1	4	0.54
Transmembrane Helix	5	26	0.74
Non-Cytoplasmic	27	53	0.68
Transmembrane Helix	54	76	0.87
Cytoplasmic	77	85	0.60
Transmembrane Helix	86	107	0.88
Non-Cytoplasmic	108	116	0.69