YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51092242
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FFFCHFSKLS LAKLLSFNSS LIHILTILRQ LIKQKFNTTF FRMFSRLALR PLTVATSRSA  60
   61 TTHSAQGLSR LPGHGSPGKV RPGFPSDNWV KGPMGVGLLA YICSGDCCAI KHEHSGLSLG 120
  121 IMEDGYYSSG ITIGILTTFA VIRLLPAIVK WADSEIIKIE SEYEKSRETK IKVLSISPSN 180
  181 GNKDPSKDNA DQNV

Type	Start	End	Confidence
Cytoplasmic	1	10	0.50
Transmembrane Helix	11	32	0.51
Non-Cytoplasmic	33	125	0.64
Transmembrane Helix	126	147	0.60
Cytoplasmic	148	194	0.59