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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51092141
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTALHTARSK WILNYLNKLY KNKRNKHIIL IEKRKRLVQS AFAIPIAIPI ASDMSTALVY  60
   61 WQSMNGGDPV DKATADWAPF VVGAAAGGSF SSSIITSSSS SLNHHPHNGH HNHHHPPHYI 120
  121 NYLAQIGCQH RVRNWPTNGN QDQADDDDAG HQIISKFLPK SAWDTVLLDV KRDVDEDGDR 180
  181 DRDRVDGNVL MVQGSSSSSS RMKAERALYY TMSAYGSSGG SVDAAQGSGS GGGRQRHAPL 240
  241 YGRFVDAEDL PATHRDVMHH HSSPSSSSEV RAMQARIPNH FREPASGPLR KLSVDLIKTY 300
  301 KHINEVYYAK KKRRAQQTQG DDDSSNKKER KLYNDGYDDD NHDYIIKNGE KFLDRYEIDS 360
  361 LIGKGSFGQV VKAYDHEEQC HVAIKIIKNK KPFLNQAQIE VKLLEMMNRA DAENKYYIVK 420
  421 LKRHFMWRNH LCLVFELLSY NLYDLLRNTN FRGVSLNLTR KFAQQLCTAL LFLSTPELNI 480
  481 IHCDLKPENI LLCNPKRSAI KIVDFGSSCQ LGQRIYHYIQ SRFYRSPEVL LGIQYDLAID 540
  541 MWSLGCILVE MHTGEPLFSG CNEVDQMNKI VEVLGMPPKY LLDQAHKTRK FFDKIVADGS 600
  601 YVLKKNQNGR KYKPPGSRKL HDILGVETGG PGGRRLDEPG HSVSDYLKFK DLILRMLDFD 660
  661 PKTRVTPYYA LQHNFFKRTA DEATNTSGAG ATANAGAGGS GSSGAGGSSG GGVGGGLGAS 720
  721 NSSSGAVSSS SAAAPTAATA AATAAGSSGS GSSVGGGSSA AQQQQAMPLP LPLPLPLPPL 780
  781 AGPGGASDGQ CHGLLMHSVA ANAMNNFSAL SLQSNAHPPP SLANSHHSTN SLGSLNHISP 840
  841 GSTGCHNNNS NSSNNNTRHS RLYGSNMVNM VGHHNSGSSN NHNSISYPHA MECDPPQMPP 900
  901 PPPNGHGRMR VPAIMQLQPN SYAPNSVPYY GNMSSSSVAA AAAAAAAAAS HLMMTDSSVI 960
  961 SASAAGGGQG GGNPGQNPVT PSAAAFLFPS QPAGTLYGTA LGSLSDLPLP MPLPMSVPLQ1020
 1021 LPPSSSSSVS SGSASVGSGG VGVGVVGQRR HITGPAAQVG ISQSVGSGSS GSATGASSSD1080
 1081 ASSSSPMVGV CVQQNPVVIH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle