YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51092093
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRLTLLAL VALLGSCSAA DGDVNVCSNV VNNLFVPQVG NCSKYFLCMN EIAVPRECPT  60
   61 DYYFGARDQE CVPLMEVECI GSCKNRGLSS FCYDRTCTKY VLYFDGTPVI RQCSDGLQYN 120
  121 ALTDRCDYPQ YVDCVDNLCS RNNNPDDIVF IPSKARCDKY YICMDGLPQV QNCTSGLQYN 180
  181 PSTQSCDFPS KVNCTVESLQ RNILPFARAP PRLADIECPS EGAHFIAHQK RQDAYYYCLN 240
  241 GRGVTLDCTP GLVFDAKREE CREPHLVGF

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	269	0.99