YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51091981
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTKPFKVL IAHTDVPPEG IEILKEQCEI LQVINEPPKN RPEILEKIRG AHAVIWGGRD  60
   61 ILNAEILDAA GPQLKAVSTM SSGINNVDVP ELKKRGIPLG STPAMLTVAV ADLTVGLLIA 120
  121 AARRFQEGRR KIDSDKWDKD HLNWMLGQDI RDSTVGFYGF GGIGQAVAKR LMGFDIKRVL 180
  181 YTTRNRVSQD IEERFNAKKV DFETLLAESD FLIIASPLTK ETLGLFNATV FNKMKETAVL 240
  241 VNVGRGKIVN QDDLYEALKS NRIFAAGLDV MDPEPLPSND KLLTLDNVVV TPHVGYATRR 300
  301 TRVDAANLAS RNVLKGLAGE PMLSPAY

Type	Start	End	Confidence
Cytoplasmic	1	101	0.49
Transmembrane Helix	102	122	0.56
Non-Cytoplasmic	123	327	0.87