YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49066129
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKYATCIFS IFALWNFWGV SAKKQDTSTG TNELPKAPMP YYTIENIDMH QQHWFTYNSL  60
   61 RQNGTLWRIG NMEQRLEMRL QSFQNQMETK LRALKQQIEP YMENVKMSNK IKMSVFKKIG 120
  121 SRHFYLEKQK KMPWDSAYDT CRQMGGPQAN ILDEKELNEI SSEETKKKYW IDINSRANDG 180
  181 ASWISTLSGR DVPFLKWKPN LATNIHRHCV YINSNEMYFE NCANDNYFAC QAEQWA

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	236	0.99