YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lectin-30A-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKYCFICVI LAWASRDVLA NKTENPLLID QVAINQQQWF TFIALKESEM QQKIVRIERS  60
   61 IEERLMAMQS KLAYALNELQ TIMGNQSVET LEKLRISHRI NPALFQRMGT RRFYIEKENK 120
  121 QNWFGASNTC RQLGGHIATI RDEQEFNEIF SRAPAGVFWI DMNAMFKNGL FASSLTGRSP 180
  181 PFFKWKKEER GNKFDCVNVY NKEMYNENCF NTHLFICQAE QWD

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	223	0.99