YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37359455
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVSELMAGA ALGLALQVLH DAIKKAKDRS LTTRCILDRL DATIFRITPL VAKVDKLSEE  60
   61 VEDSPRKVIK DLKHLLEKAV SLVEAYAELR RRNLLKKFRY KRRIKELEAS LRWMVDVDVQ 120
  121 VSQWVDIKEL MAKMSEMNTK LDEITRQPTD CICFKSNHST SQSSNQDIVE ETDRSLEENV 180
  181 ECSSDGSKPK IDIHIHWSSR KLNKDREIRF FLK

Type	Start	End	Confidence
Signal Peptide	1	21	0.83
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	213	0.99