YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50953790
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFSRVHTYT PPQCVPENTG YTYALSSSYS SDALDFETEH KLEPVFDSPR MSRRSLRLVT  60
   61 TASYSSGDSQ AIDSHISTSR ATPAKGRETR TVKQRRSASK PAFSINHLSG KGLSSSTSHD 120
  121 SSCSLRSATV LRHPVLDESL IREQTKVDHF WGLDDDGDLK GGNKAATQGN GELAAEVASS 180
  181 NGYTCRDCRM LSARTDALTA HSAIHGTTSR VYSRDRTLKP PHLGHCGRMT AGELSRVDGE 240
  241 SLCDDCKGKK HLEIHTATHS QLPQPHRVAG AMGRLCIYTG DLLVQALRRT RAAGWSVAEA 300
  301 VWSVLWLAVS APGKAASGTF WWLGSGWYQF VTLISWLNVF LLTRCLRNIC KVFVLLLPLL 360
  361 LLLGAGVSLW GQGNLFSLLP VLNWTAMQPT QRVDDSKGMH RPGPLPPSPP PKVDHKASQW 420
  421 PQESDMGQKV ASLSAQCHNH DERLAELTVL LQKLQIRVDQ VDDGREGLSL WVKNVVGQHL 480
  481 QEMGTIEPPD AKTDFMTFHH DHEVRLSNLE DVLRKLTEKS EAIQKELEET KLKAGSRDEE 540
  541 QPLLDRVQHL ELELNLLKSQ LSDWQHLKTS CEQAGARIQE TVQLMFSEDQ QGGSLEWLLE 600
  601 KLSSRFVSKD ELQVLLHDLE LKLLQNITHH ITVTGQAPTS EAIVSAVNQA GISGITEAQA 660
  661 HIIVNNALKL YSQDKTGMVD FALESGGGSI LSTRCSETYE TKTALLSLFG VPLWYFSQSP 720
  721 RVVIQPDIYP GNCWAFKGSQ GYLVVRLSMK IYPTTFTMEH IPKTLSPTGN ISSAPKDFAV 780
  781 YGLETEYQEE GQPLGRFTYD QEGDSLQMFH TLERPDQAFQ IVELRVLSNW GHPEYTCLYR 840
  841 FRVHGEPIQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle