YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16604396, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQKRLLFLL AVFTFLVSSS YGRVLKLKSD DDRPVYNHTL AVTLVEYASA VYESDLTKLF  60
   61 TWTCERCNGL TKDFEVIEVI FDVEHCLQAY VGVAKDLNAI IIAFRGTQEH SIQNWVSDLF 120
  121 WKQLDLNYPD MPDAMVHHGF YSAYHNTTLR PAVLDAITRV KKVYGANINI IVTGHSMGGA 180
  181 MASFCGLDLV VNEGEENVQV MTFGQPRVGN AAFASYYSLL VPNTFRITHD RDMVPHLPPY 240
  241 YYHFPQKTYH HFPTEVWVKD FSFSNFVLFG LEKVCDNTGE DPTCSRSVRG NSISDHLRYF 300
  301 GVELKCESWR QCSIVMNQDM ERYSRKDSRG NLFLSRTVPP KDVVKTSSLS KTGISSL

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	357	0.99