YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57238623, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKLFLTFFY SGSVKKASGT FGTIAALIPA FFILKYLGIN TLFLLSILIF VASIRVIDDY  60
   61 EKKTGIHDDK HIVIDEVAGV FLACAIAASV ENSIVNFILA FVLFRLFDIT KPSIIGKIDK 120
  121 KVKGGLGVML DDMLAGLFAG LLSAVIYGFL LKFNLVFWDI NLKDLF

Type	Start	End	Confidence
Cytoplasmic	1	13	0.82
Transmembrane Helix	14	33	0.79
Non-Cytoplasmic	34	36	0.53
Transmembrane Helix	37	57	0.74
Cytoplasmic	58	76	0.67
Transmembrane Helix	77	100	0.81
Non-Cytoplasmic	101	133	0.64
Transmembrane Helix	134	156	0.85
Cytoplasmic	157	166	0.65