YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57167386, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEKYFFVAI LMFVIGLVGI LKRQNLIMLF ISSEILLNSA NLALVAASKM HNDLNGQVFA  60
   61 LFIMGVAACE VAVGVALCVL WYRRKGTLEL KSLKEVEA

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.50
Transmembrane Helix	5	21	0.86
Cytoplasmic	22	26	0.46
Transmembrane Helix	27	47	0.56
Non-Cytoplasmic	48	58	0.83
Transmembrane Helix	59	82	0.94
Cytoplasmic	83	98	0.97