YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88191074, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAKGSELIP VLTIAGSDCS GGAGIQADLK TFSAHNLFGM SVVLSVVAEN TARVISVHDI  60
   61 PTQSVDEQML AVFEDIVPKA TKIGMIGSCE LMSCVAKNLS EFKPQNIVID PVMFAKNGYA 120
  121 LMPQENCDFF KQTIVKFADI LTPNIPEAEF LCGFKIANEE QMIKAAKHLC SLGAKAVLLK 180
  181 GGHSEINAND VFYDGKEIYI LKGERIETKN THGTGCTLSS AIASNLAKGK DLFHAVSEAK 240
  241 EYVRNAIYYS LNLGKGCGPT NHFFKFLDEK

Type	Start	End	Confidence
Signal Peptide	1	21	0.74
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	270	0.99