YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57165809, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFVSILMGS KSDYETMKEA AKTLESFGVK YELIISSAHR SPKRTKEYIA NAEEKGVKVF  60
   61 IAAAGMAAHL AGAVAAYTTK PVLGVPMSGS NLASMDSLFS TVQMPSGIPV GTLAIGKAGA 120
  121 INAAYLAMQI LAIYDVDLAQ KLKEDRLEKE KKLVSDSKEV EVLL

Type	Start	End	Confidence
Cytoplasmic	1	58	0.88
Transmembrane Helix	59	79	0.84
Non-Cytoplasmic	80	106	0.83
Transmembrane Helix	107	126	0.64
Cytoplasmic	127	164	0.77