YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57237522, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLELLNTDTL LRLWQGLFVT LEISFISIII TSIGGLFLGI LMSFKNTYIY AFCRLGLEFV  60
   61 RVMPLLVWLF VVYFGFPRWF GWDLSSVSAA IIVFSIWGCF EMMDLVRVSL QSIPKHQYES 120
  121 ASSLGLNTVQ SFAYVIIPQA MRRLTPMSMN LLTRMIKSTT FAYLIGAVEL VKVGQQIIEF 180
  181 HNRNDFAPFI IYGLIFFIFF ILCYPITLYS RKLEKKWS

Type	Start	End	Confidence
Non-Cytoplasmic	1	17	0.83
Transmembrane Helix	18	41	0.89
Cytoplasmic	42	54	0.64
Transmembrane Helix	55	76	0.81
Non-Cytoplasmic	77	79	0.63
Transmembrane Helix	80	100	0.83
Cytoplasmic	101	150	0.72
Transmembrane Helix	151	171	0.66
Non-Cytoplasmic	172	188	0.78
Transmembrane Helix	189	208	0.97
Cytoplasmic	209	218	0.90