YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57166267, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRELIEGYLG KSIEGKKSKM PAKLDFIQSA SGLFLGLFMW VHMLFVSTIL VSEDFFNSVV  60
   61 HFLELKFVYD NPVMSYLTSF LAACVLVVFF VHALLAMRKF PINYRQYQIL RTHSKKMNHS 120
  121 DTSLWWVQAF TGFIMFFLGS AHLIFIVTNA DKISGDMSGD RVVSHFMWLF YAVLLVCVEL 180
  181 HGSIGLYRLC VKWGWFEGKN VKESRKKLKT AKWIISIFFL VLGVLSLAAF IKIGYENYQN 240
  241 QTQTTAMIKN YNGANYEYTI

Type	Start	End	Confidence
Cytoplasmic	1	25	0.96
Transmembrane Helix	26	46	0.88
Non-Cytoplasmic	47	74	0.86
Transmembrane Helix	75	96	0.92
Cytoplasmic	97	123	0.95
Transmembrane Helix	124	146	0.95
Non-Cytoplasmic	147	166	0.94
Transmembrane Helix	167	190	0.92
Cytoplasmic	191	210	0.95
Transmembrane Helix	211	233	0.92
Non-Cytoplasmic	234	260	0.98