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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23394956, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPGPLLGPPS LGSAELSNQL ETEKAHKQKG HGNKEVLPAH IKGNDEDDAH KKKKVMKQQH  60
   61 SAEDHAPHTV DTEYVHVFVK NPIDSWNDGQ RIMKELEQIL HMQGYFSYLT VQQHEVSFRV 120
  121 NSNNPERKTA GDVARTINEN RGVKNNIQRR VGFYVLHAGV GDVIKDLQDP SVSSSRIELA 180
  181 EQGPDVTHIM AYMFAGAGAA AVIVIFVTLI LIKRHDRKRD KLGGLQSGIA GAETCSKDYQ 240
  241 ELCRARMAGK AGGGGNSTGG AAGGGSNEPA PSGRITSLSK ENEGRPPSSR SSTSSWSEEP 300
  301 ALTNMDISTG HMVLSYMEDH LRNKGRLQRE WEALCRYEAE PSAREAASQP QCAGLNRPGA 360
  361 PLPYDHSRVV LNHLANAEGL DYVNASTITD HDPRAPAYVA AQGPLPSTLA HFWQMIWEQG 420
  421 AVVIVALCRL QENGEVACAR YWPEEGAEVY HIYEVHLVSE HIWCDDYLVR SFYLKNLRTS 480
  481 ETRTVTQFHF LSWPHMGVPA QAKALLDFRR KVNKSYRGRR SCPIVVHGSA GAGRTGVYIL 540
  541 LDLVLERMNK GAREIDIAAT LEHLRDQRAG VVATRQQFEF VLMAVAEEVH AILKALPANT 600
  601 SGEKRELDKD PVVGGGSSST TTKEPLKEDK AQEAAEEEAP TSSSKAAAAA KKEKEKDKDK 660
  661 EEKQAKDQAK VAEPRTPAKS AKQAKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle