YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124506587, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTYYLKILL FSFLINILVL PQYENCEKGH YNGSLVLNNT QRTTINSRLL AQTQNHNPHY  60
   61 HNDPELKEII DKLNNEAIKK YQQTHDPYEQ LREVVEKNGT KIRGEHAAEP MSTLEKDLLD 120
  121 TYEEIFHEES HMLKSGRYPN DDDKTNEKSS SCECTDINNT KLTKTKGKDK YLKHLKHRCS 180
  181 RGICTCSVGS LFLTLIGLAA AKKAALAYFS GTTKTCVSSI PIFNMFNCSS VATSLQAGGA 240
  241 TCATGISDIA GTVSTAATTT IFPFSIAIYV LIAITVILII LYIWLYRRRK NSWKHECKKH 300
  301 LCK

Type	Start	End	Confidence
Cytoplasmic	1	181	0.89
Transmembrane Helix	182	201	0.87
Non-Cytoplasmic	202	264	0.66
Transmembrane Helix	265	286	0.94
Cytoplasmic	287	303	0.99