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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124506307, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKNYSLGQK CVFNKKVESY LHFDNYIINK NLNKYFVFYL PSSVIWSSSK RSVYIGKKVN  60
   61 VVLFNKNVGI VKNVGIVKNV GIVKNVGIVK NVGIVKNVGI VKNVENVKNV GNVKNVGNVE 120
  121 NVRNVKNEEY GRLTYLWKRY YCSRNIVKKG KNNSFDMDKN MDEIHVKEKI GDPTNIYLIK 180
  181 GDMRKYLKNG FIYRNNDEVN ENLRSQRCDD LKNNMNERND GHTINHSNNS LFNNYSIDYN 240
  241 TNLCVNNICS NVNNVETLLL CGCGVGKKKK RYTFNNDFIE NDGMLKKDMI IDDIISKEKY 300
  301 KNKIRFFCKV ILLYLNNYLE LSKHKLTLWV TLSSTFGYFM LGGSSIVHIS SLLVGVYLCS 360
  361 SSANAFNQII ERNIDKLMKR TQKRPLANNN PNMSVKHAEI FAILSGLNGS FILYFFNNPL 420
  421 TSFLGVFNIF LYTCIYTPLK RKTPYNTHVG SIVGSIPTLM GCTAIEQNLF FPEPWILFVT 480
  481 QFLWQFPHFY SLAYLYKEDY IKGKYKMFPL QDTNGLYTAK LCKPYLITLS SLPFILFFCG 540
  541 YTSYMYILTS ILPNLFIFYK FQKIIQKPSR ANIRSFFKHS LWHIMLLLAL TTYHTQIPDK 600
  601 NKNNDTMPVN INSNEEHNKG IHVHKDSNTE YSITKFKKKL IKYCIVFS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle