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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23613188, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLIWRLYKT LFLILYIIIL QEYVCHSSNH IKSVNRCFIP FISEYIYKQK NRKNNISYDS  60
   61 SNSHYNDKII PCGNYNKQLK YKINFCRNLY FNNKNEYNRI CSRNKLNFHN IQTDNTIYKP 120
  121 KKKYYEVGKV REKIKMYTLF KDDKINTLKC NEEESVTSET INKHDSSVKV KGRRKKNITS 180
  181 NENIMNPNNK SVSSINTNLS DSSNNKNDNS LNSKKNDNTL NSKKNDNTLN SKKNDNTLNS 240
  241 KNNNNSLNSK NNNNSLNSKK SNNSYNDKHI DHIIPEGKNK INNNIDVKHN INNKLNEINE 300
  301 EPYEDTHNKE ENSSNKNDND EKRKEENNNI TRRYIKNDQM SYNNINTNSN EYDKNASTLD 360
  361 ETYIGKTFEG YVYSVNKNAA CIKLKNINKY GLLFKNKANL GDDIEDMNDF FEKDQPVHVK 420
  421 ILGINTKKNI FYLGNIIKYN ENIKLSKGEY SKGLITKVCD SYCFIKVLKN GSTGYLHKSK 480
  481 LFCMNDKEKK NNDNQNYDNP NNDNPNYDNQ NYDNQNYNNP NYDHPNYDNQ NYDNQNYNNP 540
  541 NNDYSTSQLY NSDNLQMDFI YKLQFTKIFN IWDIIDVEIL GTPQNDYKSN YILTIPRGSK 600
  601 TFKKILNYLN VLKENEDINN IQYKGDYIYS IDNNKNDNII DSDINNHHIN NKKKKKNLYD 660
  661 IQNNMNHSPF NKFHTEDEYL FNDHVQENVH TFYEKNKKYK ITYDKENNHK MNKSYYLKKN 720
  721 KELPFNNKFK KIIKNIYDLP NTISLSMLSK TIKIPLASIK KYFIIHENKE YNSSYKINSE 780
  781 QIKRICQHFK IDCNVEQRDD NVVTKVNGTT KDCQEKVFKN VTQDRLKEGE QERVIKVEAK 840
  841 IKNDEMVMQE QKDTKEEKHM DVQFIEEKDI NVQHINVQDM DVQDMDVQDI NVQDMDVQNI 900
  901 NVQDINIQDM DVQNINNSIT LNKSTSCQTD ESRDAPGGDQ NESLDEKDSM EKSKEKKKKK 960
  961 GKSRKKNKDT NLTLKSDSIQ KSKTTLDDKK RNVVVTFIGH INHGKTSLFD YICKTNEQKK1020
 1021 EYGLITQNIR AFKATVRNNF TFTLVDTPGH EAFMPMRSRG VKISDLSILV ISGDEGIQEQ1080
 1081 TVECIKLIKE FNIKIIIAIT KVDIPNVDVD RIINDLLYHD ITTELNGGEI QVVECSIYKE1140
 1141 ESIDKLLDAI YLESEFLNLQ TNPDKKHEQA QGVVLDSYID KNGIVSINLL QNGVLNINDH1200
 1201 FYTGSSYGKV KILKDHLNKN IKSAYPSDPI KIIGYNKNSV PVAGDKFYVV ENEALAKEIA1260
 1261 EHNKNKMLTM EINNFTYDQT NMNRYKDFII SRENKIGGSS GILGENNLKN DIDGNMTRDD1320
 1321 NMTRDDNMTS DDNMTRDGNR TNNDNITSDD NMSNDYDKIK ETKMYTNNKS FQKDDFLKIH1380
 1381 LNNTNENVIN MDPSTHIGKN EIKTIYSNYI IKCDKQGSIE VLKNCMLKLQ KEDSICKIKN1440
 1441 KIIYADIGNV TSSDIKYATS FNATIIAFGV KLSNDIKGSK NSKGSKNHNN YPIIYSNVLY1500
 1501 ELIENVEKEM EKKLSKKPMG ELKGTAQILK VFNISKLGKV AGCIVKKGTI SINSNIRILR1560
 1561 NDKVIYMGKI ISIKIVKEEK TQVTEADECG IGFDNFLDFE PNDIIEAYEN 

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