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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124505617, gi...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYFSKYKVI ESNRLLYTSN VKYDNYFINI NKKNQVKNKN ESYSFIKLLF RKCIIFFIIY  60
   61 FLFIIPLNEV IYNKYDYSSK SIQHYCIRNL SECFRGKSAL NDDSESCRCS NLLKEKKKTE 120
  121 ENSEEIRKYL SDKTKKRNSL YKYKLKGSKG KSVKNIVGNK EGSIHENTDL YSDSDVEYDY 180
  181 GNLFYDCYYT EGLIDQGEEN EEEKFYEARE DFEGEEKNKC KIKESEKSFK KENDCKVENV 240
  241 ENINYERVYS WELGKEALTK LLGCSNKLSV NNVKYSDWKF KSIPTVGFSK DGDRLQEMYK 300
  301 ASVCSYTEEC QGEVYLFVKK IPIEVWIRQY NLMNDNDGEY LLDGENFIME AVACAYLSEH 360
  361 YPGLTPKLYK VLYEPECANC NEEDKNMSEN NHKKDSKHKG DSNHKSDSNH KSDSNHKSDS 420
  421 NHKSGSNHKS DCNHKSGSNH KSDSNHQSDC NHMSDHNHKS DNNHKSDSSH KSDSSHKSDS 480
  481 SHKSGSNHKS DNNHKSDSSH KSGSNHKSDH NHKSDSNHKS DSNHKNESNH KNESNHKNES 540
  541 NHKNESNHKN ESNHKNDSNH KSDSNHMSDH NHKSDNNHKS DHNHMSDHNH KSDNNHKSDN 600
  601 NHMSDHNHKS DNNHKSDNNH KSDNNHKSDH NHMSDHNHKS DNNHKSDHNH KSDSNHMSDH 660
  661 NHMSDHNHKS DHNHKSDHNH KSDNNHKSDS NHKSDSNHKS DHNHKSDSNH MSDHNHMSDH 720
  721 NHKSDHNHKS DNNHKSDSNH KSDSNHKSDH NHKSDSNHMS DHNHMSDHNH MSDHNHKSDH 780
  781 NHKSDNNHKS DSNHKSDSNH KSDSNHKSDH NHKSDHKHMS DNNHKSDNNH KSDHNHKSDN 840
  841 NHKSDHNHKS DSNHKSDSNH KSDSNHKSDS NHKSDNNHKS DHNHNSDSNH MSDHNHKSDH 900
  901 NHKSDHNHKS DNNHKSDNNH KSDHNHKSDH KKNNNNNKDN KNDDNDDSDA SDAVHEDIEL 960
  961 LESYSDLNKF NEMLTEQLNK NKDGYVVLVT ELFGEDLFQY INKRNENEDT RVRDEDKKII1020
 1021 MFEFLKLLIK LHNAGLVHLD ISPENILIEN NGELRLCDLA KCAPMYTHNL RHIKGNGNDL1080
 1081 YSFQSCQPCV GKIPCIPKEC WDIIREHIKL KIDNPFEHLS TITDQEERKK YYFDVHCVDK1140
 1141 YMLGIFYIWI WNLNYIWKRA DPPNDRTFNN FLKYNLNINV FQLAKQWPKG LKDIINKLLS1200
 1201 LESRMKTDLN ELTEHPWWIN ED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle