YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14280008
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIVLFGAPG VGKGTFAEIL SKKENLKHIN VGNILRNEIK KESNIGKEVQ NVVRSGNLVS  60
   61 DSLIINIVHD EMKNILNKKY KGFILDGFPR NMYQSKELIK MTNIDLFVNI YLPRNILIKK 120
  121 LLGRRICNIC DKNFNVSNIQ QDSFDMPPIL PSKDCIQCNG HTNLIKRKDD NEDIINHRLN 180
  181 SYESDYIPII QFFKNEKYNL IDFPLRRGIR DFDDFYSILV NYRKNEKLK

Type	Start	End	Confidence
Signal Peptide	1	17	0.53
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	229	0.99