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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124505151, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.50
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVHYFNIFL FSLPLNIILL SSQVYNQRNH YMKPHTYTNR SLCECELYAP SNYDNDPEMK  60
   61 AVMQGFDRQT SQRFEEYNER LLENKQKCKE QCNKEIQKII LKDKLEKELM DKIVTLDTDI 120
  121 QSDAIPTCVC EKSVADKVEK TCLKCAGVLG GGVTPAWGLI SGIVYTGWKT AALAAATKEA 180
  181 IAEAAAKGAA AGLKAGVKSV ISEVSSLFGV STIDDKALGL VINATNYRDA QLISGAIYKQ 240
  241 FEMTCMPPGA LPNLSNPICI SMWSKFVSTN GSSRDLIKNN IKTYVQSFVS QAETTAAHVT 300
  301 KTTTEKVTTE LTTEKTGEIA ATYMGYQTPI IASIVAILVI VLVMVIIYLI LRYRRKKKMK 360
  361 KKLQYIKLLE E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle