YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7494257
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYLLLYILL SICSYNILSI KCFENVYKRD NINNLNFKNN NYEDDEKKYY FNPQVVYHVK  60
   61 GDKTKAENVD MYDNIKNKMD ILQNLNKQYN FDKIKKEYYM DGSNKKYLNN LLKKILSNAL 120
  121 NIPQKQINIH DINTLIKMWT NMNSKDKTYS NILNNDENYF KRYIKQNTDF ADETNKITFN 180
  181 NNEKEKAQIH FIDVDYFTQL TN

Type	Start	End	Confidence
Signal Peptide	1	19	0.58
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	202	0.98