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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124504903, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDNIENPRD DNENEDRNNI FLYNNEISNE GSDSCNVLCL FLFFLSLFFI MIISADNNTA  60
   61 HTFSSPTNNN NNNNNNNTDN NDNSNNSNNS NINNKKNYIN NNNNHSNYNN YFDDDPSIKY 120
  121 RKNNNIYKDN INDEFLKKED NDNIMNNMLD NILIQCLHFK GAYKIRNKNN NNMSDGIFEA 180
  181 KLVTLKLALN NVTKSYIFFY FNPYDNNNTN HNIYILNDIP KQYKYLGFNG ININKENRYI 240
  241 FNGQGYNIST FCQLKNNVKK KNEAYKYAHT NIYNNNDNNN NNNNNINGVN ENCLCNYTIN 300
  301 INQYINKYES VSLREVDESY LYSLKGYILD EQEYYKNYLQ NEYIKLYKNY ISYIQKYYHT 360
  361 HYIEKENMIH FHSLGNVNEE IIKHQSKLES AKQNDKELSY VTLKKVKHES GTIPNHNTER 420
  421 EYTSNVDNND GNNKNNDGNN KNNDENNNNS DGNNNNNDGN NKYNDVNNKY NDVNNKNNDV 480
  481 NNKYNDGHNK NNNEHVTNAH YDGYIYSNNC NLLISFEGID IDKKYISTKV LNFSILFNIK 540
  541 SIIEISLFWS QIGTSGSIPG ASRISLISIC LNSLIDIFES LLLLYEVLLS KLLLIHFILM 600
  601 ILLKFLLFTI MEVRYVLIVW KANHQHEVNE GWEHMQRKLS KLYKYYYGSI FLLILLFYYV 660
  661 FPFFPYILLI LYLCWLPQIL LDIWRGQRNS VDIKFVFILS LCRLYLPIYI YLYPHNIFQL 720
  721 DNFSQLIDTS NTMFSILIIF IVFIQCIYML LQRIYGPRYF VNIDLLPHVH NYYKTIDVNF 780
  781 EAGIPECVIC MYDIVLKPNK YCVTPCYHIF HEKCLQQWMD IKLECPTCRG PLPNFS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle